Insertion junction: CLIP2.072966_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072966
Chromosome:chromosome 2
Location:8600378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800277 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTACAAAGAAGGGACAACCTTATGCTACCTTATGGTTGCGATATTACA
Internal bar code:GAATTTGGCTGCGACACGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2575
LEAP-Seq percent confirming:3.0303
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTTTCTCCCGTGCTGA
Suggested primer 2:CGCAAAGCACTGCTCGTATC