Insertion junction: CLIP2.072968_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072968
Chromosome:plastome
Location:131830
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802319 2717001,ChreCp055,rps11 30S ribosomal protein S11; (1 of 1) IPR019981 - Ribosomal protein S11, bacterial-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTTTCATTCTCAGAGAAGATATGTCCATTGAATACTGCCTAAAAAAC
Internal bar code:CAGAATTTACAGTCGCAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGAGCTCCAGCATAA
Suggested primer 2:TAGCTGATAGGCGAGGCAAC