Insertion junction: CLIP2.072970_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072970
Chromosome:chromosome 9
Location:2133646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395900 CSV3 Chlamydomonas-specific family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACACAGGCCCATTGGCGCACGCATCGGCAACACACATGCTATACCT
Internal bar code:TCGGTCTGAGACTGCGCAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAAGTCCTGGACGCAGG
Suggested primer 2:TACCTGACCCCATTCGGCTA