Insertion junction: CLIP2.072971_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072971
Chromosome:chromosome 17
Location:4490207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731150 (1 of 2) PTHR22811//PTHR22811:SF31 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // RE49489P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCCCGTCGGCAGCTTCCGCTAGGTGCGGTGGGCGGACGATATTGTC
Internal bar code:TTGGAGATCCTTCAGAGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCCTTGGCACATTAGC
Suggested primer 2:AAGCAATTCACACGTGTGCC