Insertion junction: CLIP2.072971_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072971
Chromosome:chromosome 17
Location:4490208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731150 (1 of 2) PTHR22811//PTHR22811:SF31 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // RE49489P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCCCACTGCACCCAGCTACCGGCGGTCACGCAGGGCGTGGGCGCAC
Internal bar code:TTTGACTCGAGGGTTTGATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAATTCACACGTGTGCC
Suggested primer 2:CATCGCCTTGGCACATTAGC