Insertion junction: CLIP2.072972_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072972
Chromosome:chromosome 2
Location:762321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078300 GPX1,PHGPx1 Glutathione peroxidase 1, selenoprotein; (1 of 4) 1.11.1.9 - Glutathione peroxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGGCGTGCGGGCCGCGGCGCCATGGAGCGTTGCTTCGGGAGGAGGCC
Internal bar code:GTCTCAATTGCCTAGGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2914
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGTGGCACAAATCCG
Suggested primer 2:CTTTGGCAAGTTCCTGGTGC