Insertion junction: CLIP2.072975_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072975
Chromosome:chromosome 3
Location:9079845
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g201776 (1 of 1) IPR006575//IPR016135 - RWD domain // Ubiquitin-conjugating enzyme/RWD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCGCACCTGCAGCTCTCCTGCCCCTTCCCCCCTACTCGGCCCCCGC
Internal bar code:AGTTTTAGTCTACGCAGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:475
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGCTGCCCTAAACATC
Suggested primer 2:TAGGAAGTCGAGTGCGGGTA