Insertion junction: CLIP2.072976_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072976
Chromosome:chromosome 10
Location:6392499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464325 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGACGCGCATTCCTCACGCTCCGGGCGCCCGGCCAAGGCGATAGCA
Internal bar code:TAGACTATGGGCGTTTTCAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2182
LEAP-Seq percent confirming:43.9024
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGAAACAACACCTCGGA
Suggested primer 2:AGGTGCATGTGATGGTTCGT