Insertion junction: CLIP2.072977_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072977
Chromosome:chromosome 10
Location:4091654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448250 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATAGCTTGGCTCGGTTACCTCCTAAAGTTTGAAATGTTGCATGTGAT
Internal bar code:TTAAGAAAATGCAACTAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4349
LEAP-Seq percent confirming:78.7234
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAACAACAACCCCGAAC
Suggested primer 2:CACAACCGGGCTTGAGTTTG