Insertion junction: CLIP2.072977_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072977
Chromosome:chromosome 10
Location:4091656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448250 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACACGCATACGACCGATGAGAAGGCAGCACCAGCCAAATCCTTCTCT
Internal bar code:TTAAGAAAATGCAACTAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:874
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACCGGGCTTGAGTTTG
Suggested primer 2:CGTCAACAACAACCCCGAAC