Insertion junction: CLIP2.072978_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072978
Chromosome:chromosome 8
Location:2245141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370500 (1 of 1) IPR013024//IPR017939 - Butirosin biosynthesis, BtrG-like // Gamma-glutamylcyclotransferase 3'UTR
Cre08.g370550 (1 of 1) 1.1.99.39 - D-2-hydroxyglutarate dehydrogenase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTATTTGAGGTCCTGACGTAAGGAGACGAAGGGGGTACTGTATTGTGT
Internal bar code:TACGGCATTTTCCCGCGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGAAAGGGGAAAGCCGG
Suggested primer 2:CGGGAGCCGTTTAGAGCTAG