Insertion junction: CLIP2.072983_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072983
Chromosome:chromosome 2
Location:4477415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106450 LCA1 (1 of 1) PTHR11440//PTHR11440:SF4//PTHR23070//PTHR23070:SF14 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE // BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED; AAA ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGACTCACACACACCTGCGTGATGAGCTCTGGGGTGAGCGACATTCT
Internal bar code:AAACCCCGGTTTCCTACCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5593
LEAP-Seq percent confirming:72.9412
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:170

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTTTGAGGGTTGGGCG
Suggested primer 2:CTTGTCTGCTTGCACACCAC