Insertion junction: CLIP2.072987_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072987
Chromosome:chromosome 9
Location:430831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g749547 (1 of 1) PF07510 - Protein of unknown function (DUF1524) (DUF1524) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTGGATGGCAAGCTAGCGGGGGGTTATTTTATGTTATCTATCGTAGT
Internal bar code:ATCTATTTTGAAACTTATTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAATTCCTCCGGCTTA
Suggested primer 2:ATTAGCTGGCGAGTCCGATG