Insertion junction: CLIP2.072989_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072989
Chromosome:chromosome 3
Location:7418383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206202 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCTAATATGAATTTGCGGAGCGTCAAGTATGCTTTACACATCGACAA
Internal bar code:CAACTCGCACCATTATCGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGCCACAGTGCCAAAAG
Suggested primer 2:CCTGGCCTTGCACACTTTTC