Insertion junction: CLIP2.072995_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072995
Chromosome:chromosome 17
Location:4823128
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g734805 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGCAGCGGCAGTGGCGGCAGTGGCGGCGGCGCGCTGCGTGTGTTGGT
Internal bar code:CTGTCAGTAGGAAGATGAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:744
LEAP-Seq percent confirming:32.5
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCGAGGCTTGGAAATGA
Suggested primer 2:ACTGCTACTGCTACTGCTGC