Insertion junction: CLIP2.073004_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073004
Chromosome:chromosome 15
Location:1789697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141606 DHC9 (1 of 1) IPR004273//IPR013602//IPR024317//IPR024743//IPR026983//IPR027417 - Dynein heavy chain domain // Dynein heavy chain, domain-2 // Dynein heavy chain, P-loop containing D4 domain // Dynein heavy chain, coiled coil stalk // Dynein heavy chain // P-loop containing nucleoside triphosphate hydrolase; Axonemal inner arm dynein heavy chain, dynein c (monomeric) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGTGGCCTGCTGGCAATGCACCGCCCAACACTCTTGCAGGACCCCG
Internal bar code:CGACCGTAATAAGGACTACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAAAGGGGAGAGTCAGC
Suggested primer 2:GGACAAGCAACCTCGAGACA