Insertion junction: CLIP2.073005_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073005
Chromosome:chromosome 9
Location:2658035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801020 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGCTTGAAGCTCTGCGAAGGTGCCACTTCACGTGGGGTCGCAGCAGC
Internal bar code:TCTGTGCTCTACCTTTTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1179
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTACTGCTAGTCTCACGC
Suggested primer 2:TTTCGAAGCAGGCGTTTGTG