Insertion junction: CLIP2.073007_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073007
Chromosome:chromosome 6
Location:3654258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278144 (1 of 13) PF01789 - PsbP (PsbP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATGGTGGAGGGTGCAGTGTTTGGTTGTGACATGACGAGCAGGGCCAA
Internal bar code:ACGGAATATCAAACAAGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:58.1818
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGCCATTACCCCCTTC
Suggested primer 2:TATCACCTTCCCCAGCGAGA