Insertion junction: CLIP2.073010_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073010
Chromosome:chromosome 16
Location:7819482
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g688526 (1 of 1) PF00069//PF01846 - Protein kinase domain (Pkinase) // FF domain (FF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGCACCTCGCCCTCCGACTCGTTACTCTTTAGTGCCGCCTCCGCCG
Internal bar code:GAATTAGACCCCCGTTGCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTTTGCTTGTGTGCGC
Suggested primer 2:AGATGCTGCGTGAAGGAGAG