Insertion junction: CLIP2.073018_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073018
Chromosome:chromosome 3
Location:6215678
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTACCTGACCAACTAACCCGACCGCGCTTGCGCTCTTTTTGCTCGGTG
Internal bar code:CCTTCTGAGCGCGCACGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1482
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCTTCACTAAGACACGT
Suggested primer 2:GAAGGATAGGGCGAAGTCGG