Insertion junction: CLIP2.073020_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073020
Chromosome:chromosome 12
Location:2671224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505300 (1 of 1) PF08317 - Spc7 kinetochore protein (Spc7) 3'UTR
Cre12.g505350 FAP10,ACA2 Flagellar Associated Protein 10; (1 of 2) PTHR24093:SF254 - PLASMA MEMBRANE CALCIUM-TRANSPORTING ATPASE 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAGTGACCCTCATTCCAAACTCTAAGTTTTCGACGGCTCCATCCCGT
Internal bar code:GGCATTGCCCCTGACTGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTGTCCGTAAGCCTCC
Suggested primer 2:GAGGCCGTGTGTTCAACAAC