Insertion junction: CLIP2.073028_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073028
Chromosome:chromosome 7
Location:3003360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333535 (1 of 1) K04856 - voltage-dependent calcium channel T type alpha-1I (CACNA1I) 5'UTR
Cre07.g800797 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGACAACCGACGGCCGTCTCGTGCCGTGCCGGTGCTTCACACAAGC
Internal bar code:GGATTATGAACGTTTCAATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3192
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGCCTTCCATTTGCAA
Suggested primer 2:ACCCCGGACATTGCACTTAG