Insertion junction: CLIP2.073034_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073034
Chromosome:chromosome 6
Location:2379690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268350 HTR9 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGCCTGGGCTGCTCTTTCCCCAAAAACTCGGTGTTTCTCAACACCAC
Internal bar code:AGGGCGGCGCGAGTCCGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCGGTCGTTTGTCAGAG
Suggested primer 2:CTTGGTGATGCCCTGGATGT