Insertion junction: CLIP2.073041_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073041
Chromosome:chromosome 3
Location:2832019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162100 PIMT2 Protein-L-isoaspartate O-methyltransferase; (1 of 3) K00573 - protein-L-isoaspartate(D-aspartate) O-methyltransferase (E2.1.1.77, pcm) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGAGAAGAAAACCGGCGTGCAGAATCCAGGCAGGGGCTTTTCCCGAT
Internal bar code:ACAAGTCCGTGCTAGGGAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTCCAACAGTCCTTCC
Suggested primer 2:CGGTGTTGCATGATGCTAGC