Insertion junction: CLIP2.073046_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073046
Chromosome:chromosome 16
Location:6825847
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g801996 (1 of 226) IPR012337 - Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGCCTGACCTGCCAGTTGCTGGGCAGCTGCCACAGCTCGGGCGCGT
Internal bar code:TAAGAACGTGCACGTGTTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACCATCATCCCTCCCG
Suggested primer 2:AGCCGTTCATGTGGAGAAGG