Insertion junction: CLIP2.073060_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.073060
Chromosome:chromosome 7
Location:909671
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g318900 DNJ2 (1 of 1) PF00226//PF13637 - DnaJ domain (DnaJ) // Ankyrin repeats (many copies) (Ank_4); DnaJ-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCCCGGCCGCGACCTGCAGCCGAAGGGCCGCCCATGGCCGCACCCA
Internal bar code:GTCGGCGATAGGAAGGTACTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:467
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCACTCTGCGGTACCTCT
Suggested primer 2:CAGTCACCAGTGCATCCTGT