Insertion junction: CLIP2.073061_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073061
Chromosome:chromosome 15
Location:5331021
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g734400 CUL2,CUL3 (1 of 1) K03347 - cullin 1 (CUL1, CDC53); Ubiquitin ligase SCF complex subunit Cullin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAAGTCCCGTCGACCCTGCCCTCGCCGCGTGCAACTCTCTTCCATGT
Internal bar code:TTGATACTATACTACAGATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1130
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATTCTGGGCTTGGGGAT
Suggested primer 2:TGCCTTGACGTTGCACATTG