Insertion junction: CLIP2.073068_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073068
Chromosome:chromosome 1
Location:3481478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCATGTGCGGTTGCTCCATGCGTACGCATGCAGCCATGCATGCCTG
Internal bar code:CATCTCTCTCCGGGCCTCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3218
LEAP-Seq percent confirming:27.5
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCATGCATGTCTAGC
Suggested primer 2:CATGCACGCAAGGATCGAAG