Insertion junction: CLIP2.073069_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073069
Chromosome:chromosome 3
Location:5185226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181350 bL17m,MRPL17 Mitochondrial ribosomal protein L17; (1 of 2) K02879 - large subunit ribosomal protein L17 (RP-L17, MRPL17, rplQ) 3'UTR
Cre03.g181400 ADC1 Aminodeoxychorismate synthase; (1 of 1) 2.6.1.85 - Aminodeoxychorismate synthase / ADC synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCATGTCCTGCTCTGCCACTGTAATGCCGAACACCACTACGCGTCGAT
Internal bar code:GTTCCTAAGGCTCCAGTAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3432
LEAP-Seq percent confirming:21.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACGCAATGCTGGGATGC
Suggested primer 2:ATGGCTTGATGCTCAGCCTT