Insertion junction: CLIP2.073071_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.073071
Chromosome:chromosome 13
Location:2591813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580700 DAL2 allantoate deiminase; (1 of 1) 3.5.3.9 - Allantoate deiminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCAGTATGCACCTACCCTCGCCTGCCCGTGCGCCGCACAGCGCGACGG
Internal bar code:GGTTTGCTCACGAAGCTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGCCAAAACGTTCAGG
Suggested primer 2:GTTTGTGTGATGGGTGTGGC