Insertion junction: CLIP2.073072_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073072
Chromosome:chromosome 16
Location:6707410
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g673150 HDA14 (1 of 1) PTHR10625:SF124 - HISTONE DEACETYLASE 9; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGGGGGGCGGTGGTTGGGGTGCTCGAGCTGCTGCGCTACTGCGGCA
Internal bar code:TTTCTGTCGGTTTTGCTAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TATTTCGGGCAGAACCACCC
Suggested primer 2:ACTCTGCGACAACCTCAGTG