Insertion junction: CLIP2.073078_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073078
Chromosome:chromosome 9
Location:4108020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399252 3'UTR
Cre09.g399289 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGATGTATGGTGTGGTCGTGGTATAGGGGCATACCTTCACCTGTCGCG
Internal bar code:GGAGCAGTGTCTTGAGAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1846
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGGGTTCAGTCGGTGTG
Suggested primer 2:GGATGACGAGGAGGACGAAC