Insertion junction: CLIP2.073080_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073080
Chromosome:chromosome 6
Location:284613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g250800 CRB1 (1 of 1) K13210 - far upstream element-binding protein (FUBP); C1, subunit of the circadian RNA-binding protein CHLAMY1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCATTGCACGTTGCAGGAAGTGTTGACCTTAACAAGACATTGGCCAC
Internal bar code:CATAGGCTCGTCACCACTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1077
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCGCACAAAACCCTTCC
Suggested primer 2:CGACCACGGTTGTGTTGTTC