Insertion junction: CLIP2.073092_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073092
Chromosome:chromosome 9
Location:1268554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800997 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGATATGCAACTTAGGCTCACATTTATCGGAATATGGTTTCTTCTTA
Internal bar code:CCCTGAGTGCAACCGGGCCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2573
LEAP-Seq percent confirming:62.963
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGCTGGCAGTTTATCT
Suggested primer 2:ATGTCTCACCCATGTGCCTG