Insertion junction: CLIP2.073093_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073093
Chromosome:chromosome 16
Location:2698685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661750 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTGCGTGCGTGCCAGCTGCCAGCCACGCGCCTAGCTCCCGACTAGGG
Internal bar code:GTGGTACTGGGAGTGCAGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3336
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCGAGATTGAGGACTAC
Suggested primer 2:CATTCACAGTCGCGCTAAGC