Insertion junction: CLIP2.073107_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073107
Chromosome:chromosome 6
Location:1704900
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g262500 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR
Cre06.g262601 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGACTGTCAAGCTGCTGGGCGGACTAGGGTGGCTTACTTGCAGCTGT
Internal bar code:CGCCCAGCCTGAATGGGAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:869
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTGCATGTGGGTGGCAT
Suggested primer 2:GCACAAGCTGGTGAATTCGG