Insertion junction: CLIP2.073111_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073111
Chromosome:chromosome 1
Location:3746545
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g800071 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATATCGTACAACATCAGCATATAGGCCTACGCGTGTTTTGTTGTACA
Internal bar code:AAGCAGCGCCTTCATAGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3446
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTTGATGGTCCCAATGA
Suggested primer 2:CGCAAGTTCACACCATTGCA