Insertion junction: CLIP2.073111_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073111
Chromosome:chromosome 17
Location:4962937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735550 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATCCGGGTCAAACCGACAGACATGTACCGCAACAGAACCATTTGGCC
Internal bar code:TAGCGCGTTAGGTCATGGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCATTGATTTGCGGCGAG
Suggested primer 2:GTGCAGTGTCACACGGTTTC