Insertion junction: CLIP2.073120_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073120
Chromosome:chromosome 16
Location:532817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801874 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTACTGACTGCCTACTCTCGTGCCGCCTGCAAGCCCACTCCGCCTT
Internal bar code:GTGTGGACGGGAGGCAGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGGAAAAGGGCTGATC
Suggested primer 2:TGGAAGGTGGTGTCATCACG