Insertion junction: CLIP2.073122_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073122
Chromosome:chromosome 17
Location:3254808
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721800 (1 of 4) IPR009019 - K homology domain, prokaryotic type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGTCGGCCTCAGACATTGCACACCGTGGCGTGGGCGCAGTCCAATAAT
Internal bar code:GTTGGCGTTTTTACCGTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1198
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGTGGTTGTTGGCAAGA
Suggested primer 2:GCAGATGGAGTAGGCCGTAC