Insertion junction: CLIP2.073124_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073124
Chromosome:chromosome 8
Location:3792223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGAGACTCGAGTGGGCTGTCAGTGACACGACGTGTACGTTCTGTGTG
Internal bar code:CACTCACTGGTATATAATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2500
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTTCCGTGCAGTCTGCT
Suggested primer 2:TGTTGCCGTGCTGTACTGAT