Insertion junction: CLIP2.073131_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.073131
Chromosome:chromosome 6
Location:3328545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277700 (1 of 1) 2.7.1.108 - Dolichol kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTATTTATGTGTGCCTGGCTGTAAACGTGCGCCCCTCATGTTGCAGAA
Internal bar code:TGATGTGTGTCATGAGAGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1448
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTCGAAGCGCTTCTTC
Suggested primer 2:CAAAGGTGTGAATGCAGGCC