Insertion junction: CLIP2.073132_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073132
Chromosome:chromosome 12
Location:3783554
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g514450 SPL20 Pre-mRNA splicing factor; (1 of 1) K12829 - splicing factor 3B subunit 2 (SF3B2, SAP145, CUS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAATTTGATGGATGGGTAAGGTGGAGCACAGTGAGAAAAGGGTTTCT
Internal bar code:TCCGGGCTGTGGCTATAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAAGTCCGCAGTGGGAA
Suggested primer 2:CAGCTGGCAATGCAGCATAG