Insertion junction: CLIP2.073141_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073141
Chromosome:plastome
Location:59840
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTATATAGTTAAAGAAAAACACGAGTAATATTCTGTAAAGAAAGTTA
Internal bar code:AGCTCACGCACATGTTACGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:149
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCCTCGTCTAAGCGCTA
Suggested primer 2:CAGAAAGGACGCTCTGGTGT