Insertion junction: CLIP2.073146_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.073146
Chromosome:chromosome 16
Location:1061228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649400 RRM15,CPLD16 Putative RNA methyl transferase; (1 of 1) PTHR11061:SF12 - RNA BINDING PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACGCGCGCGCGCGCATCCAACGGTAACCAGCAGCAATTTTGATTGCT
Internal bar code:TGAGCTTTTGTTAGGCTATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:406
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGACACGCACCGGTAA
Suggested primer 2:CAAACTGAACTTGCCGTGGG