Insertion junction: CLIP2.073149_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073149
Chromosome:chromosome 6
Location:6256270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292249 PHC50 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGGTTGTATGTATTCAGCGGTGCTCACAAACTATGCGTTTCCTACA
Internal bar code:TAGAATAGGGTCTGGTTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCGTGCGGTCTCGTGTAA
Suggested primer 2:GCCTCTCCTGGGTCTCAGTA