Insertion junction: CLIP2.073151_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073151
Chromosome:chromosome 7
Location:5230545
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g349152 (1 of 2) IPR000104//IPR011598 - Antifreeze protein, type I // Myc-type, basic helix-loop-helix (bHLH) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGCCTCATCCTTACCTCGTCATTGCACACTCCCCCCTCGCTCAATGC
Internal bar code:CCGATGTTCGTCTAATAACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:648
LEAP-Seq percent confirming:32.2581
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTAGCTCAAGTCACC
Suggested primer 2:CTAAGCGCGATGACGTTTGG