Insertion junction: CLIP2.073156_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.073156
Chromosome:chromosome 17
Location:4269206
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g729800 ALB3B ALBINO3-like translocon protein; (1 of 3) K03217 - YidC/Oxa1 family membrane protein insertase (yidC, spoIIIJ, OXA1) 3'UTR
Cre17.g729850 PF6-IP4,C1a-18,FAP227 Flagellar central pair-Associated Protein 227; (1 of 5) 2.7.1.68 - 1-phosphatidylinositol-4-phosphate 5-kinase / Type I PIP kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACATATACGTAGCCACTTTTGCATAAGGCTTGCAGCGCGCTCGGCAA
Internal bar code:GCCATGAAATCATACCAATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGGAGGTGGTATCCT
Suggested primer 2:CCATGGTGGCATGTTTGGTG