Insertion junction: CLIP2.073163_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.073163
Chromosome:chromosome 6
Location:7760148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303000 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGAGGTAAATGCAAGGGTAAATGCGCTTGTGTAGAGCTAAAGGCGTT
Internal bar code:GAGTGCCTTGAGGTCACTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACCTATCGCATAGCCG
Suggested primer 2:TCTCTAACCCCTACCACCCG