Insertion junction: CLIP2.073174_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.073174
Chromosome:chromosome 8
Location:1867244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g367300 ESS101 (1 of 2) PF17035 - Bromodomain extra-terminal - transcription regulation (BET) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGCAATTATGTGCAGGTATGCATCGGGCAACAGGTACCAAGCAAAG
Internal bar code:AAGCCCGCAATTCACAGTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTGGCATGTTGCGTTGT
Suggested primer 2:AGCGTTGAGAAGCGTGGTAA